- Bay Area Discovery Museum
 - Beat Museum, The
- The Beat Museum, located in the North Beach area of San Francisco, features collections from writers including Kerouac, Ginsberg, and Ferlinghetti. - California Academy of Sciences (6)
- California Indian Museum and Cultural Center
- Offers history, culture, and contemporary life of California Indians, as well as information about the staff and events. - Exploratorium (8)
- Collection of the Exploratorium's online science exhibits, games, and teaching tools. The San Francisco museum introduces children to the life, earth, and space sciences as well as human perception with hands-on exhibits. - Gold Rush Trail/ Gold Rush Trail Foundation
- San Francisco's outdoor history museum is a walking tour of gold rush era historical monuments, areas and points of interest. - Magnes Museum
- Cultural partnership uniting The Judah L. Magnes Museum and The Jewish Museum San Francisco. - Musée Mécanique (4)
- Museum of the City of San Francisco
- Preserving the history of the City; online exhibits include the 1906 earthquake and a 1965-69 chronology of local rock and roll. - National Maritime Museum Association
- Operates the USS Pampanito, a WWII submarine and assists with the San Francisco Maritime National Historical Park. - Ripley's Believe It or Not! Museum
- Explore a world of improbabilities located at Fisherman's Wharf. - San Francisco Fire Department Museum
- Includes department history, exhibit information, and more. - Strybing Arboretum & Botanical Gardens
- Celebrating the bond between people and plants, the San Francisco Botanical Garden is located within Golden Gate Park. - Surf Style
- Looks at retro-progressive surf culture, including the 1970s and the contemporary single fine art movement. Includes art, films, and events. - Wax Museum
- Site includes admission prices, directions, and a list of the wax figures in the museum. - Zeum
- New art and technology centre for young people lets you explore firsthand a range of visual, performing and media arts.
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