- Cytokines Online Pathfinder Encyclopaedia (COPE)
 - A vast amount of information on cytokine research and related subjects. - Database of Macromolecular Movements
- Systematic, annotated database of biologically significant protein and nucleic acid motions, with protein morpher that generates and renders plausible interpolations of motions.
- EF-Hand Calcium-Binding Proteins Data Library
- A collection of information on calcium-binding proteins, including sequences, structural data, references, and miscellaneous other tidbits.
- Enzyme Nomenclature Database
- Contains information by class, description, chemical compound, and cofactor.
- Enzymes
- Provides a basic introduction to enzymes, their catalytic activity, and enzyme synthesis.
- EnzymesStuff FAQs
- Adapted from the book 'Enzymes for Autism and other Neurological Conditions.'
- EnzymeStuff
- Informational resources for digestive enzymes.
- ExPASy Molecular Biology Server
- Expert Protein Analysis System proteomics server of the Swiss Institute of Bioinformatics, dedicated to the analysis of protein sequences and structures, as well as 2D PAGE.
- Folding@home
- Distributed client aimed at using idle CPU power via a screen saver to help simulate protein folding.
- Genome@home
- Distributed computing project to understand the genome by reverse engineering new protein sequences for existing folds. Led by the Pande Group at Stanford University.
- Green Fluorescent Protein (GFP) (4)
- Günter Blobel (3)
- In-silico Screening for Anthrax Toxin Inhibitors@
- International Fibrinogen Research Society (IFRS)
- Promotes clinical and basic research interest in fibrinogen.
- Introduction to Enzymes
- Introduction to enzymes, classification, role of coenzymes, catalytic reactions, regulation of enzyme activity, and the use of enzyme in pathology.
- Midkine.org
- Summarizes the properties and medical application of midkine, a low molecular-weight protein that belongs to growth factors or cytokines.
- Molecular Modeling: A Method for Unraveling Protein Structure and Function
- A basic introduction to the science from the National Centre for Biotechnology Information.
- Molecules of Life
- An introduction to the techniques used to gain understanding of the structure of protein molecules. Topics include x-ray crystallography and folding predictions.
- Mucking About With Myosin Motor Mutants
- Investigations of the molecular machine that drives muscle contraction, cell division, and a variety of other processes in non-bacterial cells.
- PEDANT: Protein Extraction, Description, and ANalysis Tool
- A software system for completely automatic and exhaustive analysis of protein sequence sets, from individual sequences to complete genomes.
- PENCE Inc.
- Network of Canadian researchers from universities, hospitals, institutes, and government labs specialising in proteins and proteomics.
- Protein Data Bank@
- At Brookhaven National Laboratory.
- Protein Kinase Resource
- Comprehensive database on protein kinases delivering an integrated and in-depth view of protein kinase sequence, structure, and function.
- ProteinSociety.org
- Nonprofit scientific and educational organisation dedicated to furthering research and development in protein science. Site features organisation info, membership details, symposiums, journals, as well as education and outreach programmes offered in the fields of biology, medicine, and technology related to protein studies.
- ProteoMonitor
- Offers a subscription to weekly news about proteomics technology.
- Rel/NF-kB Transcription Factor
- Information and resources for researchers interested in transcription factor NF-kB.
- SCOP: Structural Classification of Proteins (1)
- SWISS-PROT
- Curated protein sequence database which strives to provide a high level of annotations, a minimal level of redundancy, and high level of integration with other databases.
- The Protein Movie Generator (PMG)
- PMG provides an easy way to generate pictures and movies of protein structures, with the concern of integrating the most frequently used concepts of the molecular graphics fields via the software Dino.
- Wikipedia: Enzyme
- User-created article about enzymes, the proteins which act as biochemical catalysts in metabolism. Offers etymology, enzyme catalysis, biological function, and industrial uses.
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